Selected Talks
- T. Hinze, M. Schumann, C. Bodenstein, I. Heiland, S. Schuster. Biochemical Frequency Control by Synchronisation of Coupled Repressilators: An In-silico Study of Modules for Circadian Clock Systems. Invited talk at University of Verona, Italy, April 27, 2011
- T. Hinze, M. Schumann, S. Schuster. Synchronisation of Biological Clock Signals: Capturing Coupled Repressilators from a Control Systems Perspective. Fourth International Conference on Bio-Inspired Systems and Signal Processing (BIOSIGNALS2011), Rome, Italy, January 26, 2011
- T. Hinze. Capturing Circadian Clocks from the Perspective of Phase-Locked Loops. Talk at Max-Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany, June 23, 2010
- M. Mittag, S. Seitz, O. Voytsekh. Multiple roles of an E-box element within the circadian controlled promoter of the c3 gene. 14th International Conference on the Cell and Molecular Biology of Chlamydomonas, Norton, MA, USA, 06-10 June 2010
- T. Hinze, M. Schumann. Capturing Circadian Clocks from a Systems Point of View. Talk at Ilmenau University of Technology, Institute for Automation and Systems Engineering, Simulation and Optimal Processes Group, Ilmenau, Germany, April 21, 2010
- M. Mittag, O. Voytsekh, S. Seitz. Molecular components of the circadian system of Chlamydomonas reinhardtii and their role in temperature entrainment. Dreizehnte Wissenschaftliche Tagung der Sektion Phykologie, Insel Reichenau, 04-17 March 2010
- T. Hinze. Membrane Systems Combining Variable Molecular Structures with Discretised Reaction Kinetics: From a Toy to a Tool in Systems Biology. Invited talk at University Milan-Bicocca, Department of Informatics, Systems and Communications, Research Group Bioinformatics, Natural Calculus, Systems Biology, Milan, Italy, November 25, 2009
- O. Voytsekh, S. Schäuble. Experimental and Modelling Studies of Circadian-Controlled Processes in Chlamydomonas reinhardtii. Workshop of the Jena Centre for Bioinformatics, Jena, Germany, November 20, 2009
- T. Hinze, I. Heiland, B. Schau, T. Lenser, S. Schuster. Reverse Engineering by Artificial Network Evolution. International Workshop Integrative Network Inference in Systems Biology (IWINISB2009), Jena, Germany, October 09, 2009
- I. Heiland, S. Schäuble, O. Voytsekh, M. Mittag, S. Schuster. Modelling Daily Variations in Amino Acid Metabolism using Elementary Flux Mode Analysis. Invited talk at International Conference "Retrograde Signaling in Plants", Berlin, Germany, October 02, 2009
- T. Hinze, T. Lenser, G. Escuela, I. Heiland, S. Schuster. Cell Signalling P Systems with Discretised Reaction Kinetics. Invited talk at 19. Theorietag Automaten und Formale Sprachen (TT19), Wittenberg, Germany, September 29, 2009
- I. Heiland. Biomathematical Modelling and its Applications to Biochemistry: What can Systems Biology do? Invited talk at University of Bergen, Norway, September 23, 2009
- T. Hinze, T. Lenser, G. Escuela, I. Heiland, S. Schuster. Modelling Signalling Networks with Incomplete Information about Protein Activation States: A P System Framework of the KaiABC Oscillator. Tenth International Workshop on Membrane Computing (WMC10), Curtea de Arges, Romania, August 24, 2009
- T. Hinze, R. Fassler, G. Escuela, B. Ibrahim, S. Schuster. Computation by Synthetic Cell Signaling and Oscillating Processes Modelled using Mass-Action Kinetics. Fifth Conference on Computability in Europe (CiE2009), Heidelberg, Germany, July 20, 2009
- T. Hinze. Biologically Inspired Computing: Successes and Challenges. Invited talk at Dresden University of Technology, Institute of Computer Engineering, Professur für VLSI-Entwurfssysteme, Diagnostik und Architektur, April 15, 2009 (in German)
- O. Voytsekh, S. Seitz, D. Iliev, M. Mittag. The circadian RNA-binding protein CHLAMY1 can integrate temperature information. Annual Conference of the Association for General and Applied Microbiology, Ruhr-Universität Bochum, March 2009
- I. Heiland, T. Hinze, O. Voytsekh, O. Ebenhöh, M. Mittag, S. Schuster. The Role of Phosphorylation in Circadian Rhythms. Third FEBS Advanced Lecture Course on Systems Biology: From Molecular Biology to Biological Function (FEBS-SysBio2009), Alpbach, Austria, March 7-13, 2009
- I. Heiland. Biological Oscillations - Modelling Circadian Rhythms. Invited talk at Ruhr-Universität Bochum, Institute of Physiological Chemistry, Bochum, Germany, December 8, 2008
Selected Poster Presentations
- M. Schumann, T. Hinze, S. Schuster. Synchronisation of Clocks: Comparing Mechanisms in Biological and Technical Distributed Systems. Poster presentation, German Conference on Bioinformatics (GCB2010), Carolo-Wilhelmina University of Technology Braunschweig, 2010
- P. Kießling, J. Kelm, O. Voytsekh, S. Schäuble, I. Heiland, S. Schuster, M. Mittag. A systems biology approach to improve nitrate-uptake in Chlamydomonas reinhardtii during day-phase. 14th International Conference on the Cell and Molecular Biology of Chlamydomonas, Norton, MA, USA, 06-10 June 2010
- R. Haberland, T. Hinze. Prolog-based XML processing for compact representation and deductive evaluation of biological reaction networks. International Conference Biosystems Analysis and Engineering (BioSys2009), Hamburg University of Technology, September 2009
- B. Schau, T. Hinze, T. Lenser, I. Heiland, S. Schuster. Control System-Based Reverse Engineering of Circadian Oscillators. German Conference on Bioinformatics (GCB2009), Martin-Luther University Halle-Wittenberg, Germany, 2009
- I. Heiland, T. Hinze, O. Voytsekh, M. Mittag, S. Schuster. Temperature Regulation of Circadian Rhythms. German Conference on Bioinformatics (GCB2009), Martin-Luther University Halle-Wittenberg, Germany, 2009
- S. Schäuble, I. Heiland, O. Voytsekh, M. Mittag, S. Schuster. Modelling Changes in Amino Acid Metabolism during Day-Night Cycles. German Conference on Bioinformatics (GCB2009), Martin-Luther University Halle-Wittenberg, Germany, 2009
- P. Kießing, J. Kelm, O. Voytsekh, M. Mittag. Improvement of nitrogen-uptake in Chlamydomonas reinhardtii during day-phase by genetic manipulation of relevant genes. Zweites Interdisziplinäres Doktorandensymposium, Potsdam Graduate School, 2009
- O. Voytsekh, S. Schäuble, P. Kießling, J. Kelm, I. Heiland, S. Schuster, M. Mittag. A Systems Biology Approach to Improve Nitrogen-Uptake in Chlamydomonas reinhardtii during Day-Phase. Gordon Conference Chronobiology, Newport, USA, 2009
- I. Heiland, T. Hinze, O. Voytsekh, O. Ebenhöh, M. Mittag, S. Schuster. The Role of Phosphorylation in Circadian Rhythms. German Symposium on Systems Biology 2009, Heidelberg, Germany, 2009
- T. Hinze, T. Lenser, I. Heiland, S. Schuster. Backtracking Membrane Systems Unravel Stable Oscillations in Distributed Reaction Networks. The IET Conference on Synthetic Biology, Systems Biology and Bioinformatics (BioSysBio2009), University of Cambridge, UK, 2009
- I. Heiland, T. Hinze, O. Voytsekh, O. Ebenhöh, M. Mittag, S. Schuster. The Role of Phosphorylation in Circadian Rhythms. Third FEBS Advanced Lecture Course onms Biology: From Molecular Biology to Biological Function (FEBS-SysBio2009), Alpbach, Austria, 2009